primerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs

Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.

Version: 1.0.5
Depends: R (≥ 3.0.0), directlabels, gridExtra
Imports: ggplot2, grid, XML, ape, httr, lubridate, plyr, scales, stringr, foreach, reshape2, RCurl
Published: 2020-01-23
Author: Jim Hester
Maintainer: Jim Hester <james.f.hester at>
License: GPL-2
NeedsCompilation: yes
CRAN checks: primerTree results


Reference manual: primerTree.pdf


Package source: primerTree_1.0.5.tar.gz
Windows binaries: r-devel:, r-devel-UCRT:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): primerTree_1.0.5.tgz, r-release (x86_64): primerTree_1.0.5.tgz, r-oldrel: primerTree_1.0.5.tgz
Old sources: primerTree archive


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