CRAN Package Check Results for Package tidySEM

Last updated on 2021-08-03 05:53:06 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.10 27.04 316.24 343.28 OK
r-devel-linux-x86_64-debian-gcc 0.1.10 23.42 222.91 246.33 OK
r-devel-linux-x86_64-fedora-clang 0.1.10 403.19 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.10 396.69 OK
r-devel-windows-x86_64 0.1.10 31.00 345.00 376.00 OK
r-devel-windows-x86_64-gcc10-UCRT 0.1.10 OK
r-patched-linux-x86_64 0.1.10 33.47 294.41 327.88 OK
r-patched-solaris-x86 0.1.10 463.90 ERROR
r-release-linux-x86_64 0.1.10 26.12 298.05 324.17 OK
r-release-macos-arm64 0.1.10 WARN
r-release-macos-x86_64 0.1.10 OK
r-release-windows-ix86+x86_64 0.1.10 55.00 259.00 314.00 OK
r-oldrel-macos-x86_64 0.1.10 OK
r-oldrel-windows-ix86+x86_64 0.1.10 45.00 337.00 382.00 OK

Check Details

Version: 0.1.10
Check: Rd cross-references
Result: NOTE
    Undeclared package ‘mclust’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.10
Check: examples
Result: ERROR
    Running examples in ‘tidySEM-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: run_mx
    > ### Title: Run as OpenMx model with sensible defaults
    > ### Aliases: run_mx
    >
    > ### ** Examples
    >
    > df <- iris[1:3]
    > names(df) <- paste0("X_", 1:3)
    > run_mx(measurement(tidy_sem(df), meanstructure = TRUE))
    Running model with 9 parameters
    Error: C stack usage 287806612 is too close to the limit
    Error: The job for model 'model' exited abnormally with the error message: User interrupt
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.1.10
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘Generating_syntax.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    This is lavaan 0.6-9
    lavaan is FREE software! Please report any bugs.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘Generating_syntax.Rmd’
    
    --- re-building ‘Plotting_graphs.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    This is lavaan 0.6-9
    lavaan is FREE software! Please report any bugs.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 286-289 (Plotting_graphs.Rmd)
    Error: processing vignette 'Plotting_graphs.Rmd' failed with diagnostics:
    polygon edge not found
    --- failed re-building ‘Plotting_graphs.Rmd’
    
    --- re-building ‘Tabulating_results.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘Tabulating_results.Rmd’
    
    --- re-building ‘sem_graph.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    Warning in lav_object_post_check(object) :
     lavaan WARNING: some estimated ov variances are negative
    Warning in lav_partable_check(lavpartable, categorical = lavoptions$categorical, :
     lavaan WARNING: parameter table does not contain intercepts for one or more variables: [y_1 y_2 y_3]
    Warning in lav_object_post_check(object) :
     lavaan WARNING: some estimated ov variances are negative
    Warning in lav_object_post_check(object) :
     lavaan WARNING: some estimated ov variances are negative
    --- finished re-building ‘sem_graph.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Plotting_graphs.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-arm64